User:Michael Strong/H1N1/HA

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Protein Structural Homolgy Model


Sequence Polymorphisms
All Polymorphisms

Multiple Sequence Alignment
H1N1 Swine Flu Multiple Sequence Alignment of HA Protein, 68 sequences

gi|229396357_A/New_York/12/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229892708_A/Canada-AB/RV153     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396399_A/New_York/18/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536064_A/New_York/20/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536055_A/New_York/20/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396487_A/New_York/19/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227977099_A/New_York/19/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396410_A/New_York/31/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396419_A/New_York/23/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396381_A/New_York/11/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396443_A/New_York/10/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229484031_A/Canada-ON/RV152     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229535797_A/New_York/22/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536129_A/New_York/13/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536100_A/Massachusetts/0     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229535909_A/Massachusetts/0     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229535834_A/California/14/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229892704_A/Canada-ON/RV152     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229598877_A/Ohio/07/2009        MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396504_A/Ohio/07/2009        MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396494_A/Ohio/07/2009        MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229892702_A/Canada-ON/RV152     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229783398_A/New_York/1682/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|237511819_A/Mexico/4108/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536049_A/Arizona/02/2009     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVDLL 50 gi|229536088_A/Indiana/09/2009     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229484027_A/Canada-NS/RV153     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229892700_A/Canada-NS/RV153     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229892710_A/Canada-NS/RV153     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|237511821_A/Mexico/4115/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|237511811_A/Mexico/4482/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|237511799_A/Mexico/4486/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|237511817_A/Mexico/4603/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|237511795_A/Mexico/4604/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229783367_A/Korea/01/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229783377_A/New_York/1669/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536022_A/Arizona/01/2009     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536003_A/Kansas/02/2009      MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536121_A/Michigan/02/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229598896_A/Texas/15/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229609563_A/Catalonia/P154/     -ANNSTDTVDTVLEKNVTVTHSVNLL 25 gi|229299521_A/Texas/04/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|228860929_A/Netherlands/602     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229484029_A/Mexico/InDRE448     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229535997_A/South_Carolina/     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNIL 50 gi|229609557_A/Catalonia/P148/     HANNSTDTVDTVLEKNVTVTHSVNIL 26 gi|229299515_A/Texas/04/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229396467_A/Texas/06/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229535816_A/Texas/09/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229535985_A/Texas/08/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536075_A/Texas/07/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229368677_A/Denmark/513/200     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227831826_A/Texas/04/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227831774_A/Texas/05/2009       MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227831776_A/California/06/2     MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227831759_A/California/05/2     MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227977104_A/California/10/2     MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536135_A/Colorado/03/200     MKAILVVMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|228481046_A/Auckland/1/2009     --VTHSVNLL 8 gi|237624327_A/swine/Alberta/O     MKAILVIMLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229536010_A/Kansas/03/2009      MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|228495370_A/Regensburg/Germ     VTVTHSVNLL 10 gi|229892706A/Mexico/InDRE4114     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229535949_A/California/04/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227809830_A/California/04/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|229299517_A/California/07/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|228017758_A/California/08/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 gi|227977172_A/California/07/2     MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLL 50 *****::*

gi|229396357_A/New_York/12/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229892708_A/Canada-AB/RV153     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396399_A/New_York/18/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536064_A/New_York/20/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536055_A/New_York/20/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396487_A/New_York/19/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|227977099_A/New_York/19/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396410_A/New_York/31/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396419_A/New_York/23/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396381_A/New_York/11/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396443_A/New_York/10/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229484031_A/Canada-ON/RV152     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229535797_A/New_York/22/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536129_A/New_York/13/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536100_A/Massachusetts/0     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229535909_A/Massachusetts/0     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229535834_A/California/14/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229892704_A/Canada-ON/RV152     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229598877_A/Ohio/07/2009        EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYVVETS 100 gi|229396504_A/Ohio/07/2009        EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396494_A/Ohio/07/2009        EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229892702_A/Canada-ON/RV152     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229783398_A/New_York/1682/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|237511819_A/Mexico/4108/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536049_A/Arizona/02/2009     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536088_A/Indiana/09/2009     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229484027_A/Canada-NS/RV153     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229892700_A/Canada-NS/RV153     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229892710_A/Canada-NS/RV153     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|237511821_A/Mexico/4115/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|237511811_A/Mexico/4482/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|237511799_A/Mexico/4486/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|237511817_A/Mexico/4603/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|237511795_A/Mexico/4604/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229783367_A/Korea/01/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229783377_A/New_York/1669/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536022_A/Arizona/01/2009     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536003_A/Kansas/02/2009      EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536121_A/Michigan/02/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229598896_A/Texas/15/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229609563_A/Catalonia/P154/     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 75 gi|229299521_A/Texas/04/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|228860929_A/Netherlands/602     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229484029_A/Mexico/InDRE448     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229535997_A/South_Carolina/     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229609557_A/Catalonia/P148/     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 76 gi|229299515_A/Texas/04/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229396467_A/Texas/06/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229535816_A/Texas/09/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229535985_A/Texas/08/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536075_A/Texas/07/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229368677_A/Denmark/513/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|227831826_A/Texas/04/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|227831774_A/Texas/05/2009       EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|227831776_A/California/06/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|227831759_A/California/05/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|227977104_A/California/10/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536135_A/Colorado/03/200     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|228481046_A/Auckland/1/2009     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 58 gi|237624327_A/swine/Alberta/O     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229536010_A/Kansas/03/2009      EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|228495370_A/Regensburg/Germ     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 60 gi|229892706A/Mexico/InDRE4114     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETS 100 gi|229535949_A/California/04/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100 gi|227809830_A/California/04/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100 gi|229299517_A/California/07/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100 gi|228017758_A/California/08/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100 gi|227977172_A/California/07/2     EDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETP 100 *********************************************:***.

gi|229396357_A/New_York/12/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229892708_A/Canada-AB/RV153     SSDKGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396399_A/New_York/18/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536064_A/New_York/20/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536055_A/New_York/20/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396487_A/New_York/19/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227977099_A/New_York/19/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396410_A/New_York/31/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396419_A/New_York/23/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396381_A/New_York/11/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396443_A/New_York/10/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229484031_A/Canada-ON/RV152     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229535797_A/New_York/22/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536129_A/New_York/13/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536100_A/Massachusetts/0     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229535909_A/Massachusetts/0     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229535834_A/California/14/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229892704_A/Canada-ON/RV152     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229598877_A/Ohio/07/2009        SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHXSNKGVT 150 gi|229396504_A/Ohio/07/2009        SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396494_A/Ohio/07/2009        SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229892702_A/Canada-ON/RV152     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229783398_A/New_York/1682/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|237511819_A/Mexico/4108/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536049_A/Arizona/02/2009     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536088_A/Indiana/09/2009     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGIT 150 gi|229484027_A/Canada-NS/RV153     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229892700_A/Canada-NS/RV153     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229892710_A/Canada-NS/RV153     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|237511821_A/Mexico/4115/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|237511811_A/Mexico/4482/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|237511799_A/Mexico/4486/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|237511817_A/Mexico/4603/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|237511795_A/Mexico/4604/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229783367_A/Korea/01/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229783377_A/New_York/1669/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536022_A/Arizona/01/2009     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536003_A/Kansas/02/2009      SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536121_A/Michigan/02/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229598896_A/Texas/15/2009       SSDNGTCYPGDFIDYEELREQLSSMSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229609563_A/Catalonia/P154/     SSDNGTCYPGDFIDYEELREQLSSMSSFERFEIFPKTSSWPNHDSNKGVT 125 gi|229299521_A/Texas/04/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|228860929_A/Netherlands/602     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229484029_A/Mexico/InDRE448     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229535997_A/South_Carolina/     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229609557_A/Catalonia/P148/     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 126 gi|229299515_A/Texas/04/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229396467_A/Texas/06/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229535816_A/Texas/09/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229535985_A/Texas/08/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536075_A/Texas/07/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229368677_A/Denmark/513/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227831826_A/Texas/04/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227831774_A/Texas/05/2009       SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227831776_A/California/06/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227831759_A/California/05/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227977104_A/California/10/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536135_A/Colorado/03/200     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|228481046_A/Auckland/1/2009     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 108 gi|237624327_A/swine/Alberta/O     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229536010_A/Kansas/03/2009      SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|228495370_A/Regensburg/Germ     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 110 gi|229892706A/Mexico/InDRE4114     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229535949_A/California/04/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227809830_A/California/04/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|229299517_A/California/07/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|228017758_A/California/08/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 gi|227977172_A/California/07/2     SSDNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVT 150 ***:********************:****************** ****:*

gi|229396357_A/New_York/12/200     XACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229892708_A/Canada-AB/RV153     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396399_A/New_York/18/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536064_A/New_York/20/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536055_A/New_York/20/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396487_A/New_York/19/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227977099_A/New_York/19/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396410_A/New_York/31/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396419_A/New_York/23/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396381_A/New_York/11/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396443_A/New_York/10/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229484031_A/Canada-ON/RV152     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229535797_A/New_York/22/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536129_A/New_York/13/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536100_A/Massachusetts/0     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229535909_A/Massachusetts/0     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229535834_A/California/14/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229892704_A/Canada-ON/RV152     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229598877_A/Ohio/07/2009        AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396504_A/Ohio/07/2009        AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396494_A/Ohio/07/2009        AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229892702_A/Canada-ON/RV152     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229783398_A/New_York/1682/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|237511819_A/Mexico/4108/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536049_A/Arizona/02/2009     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536088_A/Indiana/09/2009     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229484027_A/Canada-NS/RV153     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229892700_A/Canada-NS/RV153     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229892710_A/Canada-NS/RV153     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|237511821_A/Mexico/4115/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|237511811_A/Mexico/4482/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|237511799_A/Mexico/4486/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|237511817_A/Mexico/4603/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|237511795_A/Mexico/4604/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229783367_A/Korea/01/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229783377_A/New_York/1669/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536022_A/Arizona/01/2009     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536003_A/Kansas/02/2009      AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536121_A/Michigan/02/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229598896_A/Texas/15/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229609563_A/Catalonia/P154/     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 175 gi|229299521_A/Texas/04/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|228860929_A/Netherlands/602     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229484029_A/Mexico/InDRE448     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229535997_A/South_Carolina/     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229609557_A/Catalonia/P148/     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 176 gi|229299515_A/Texas/04/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229396467_A/Texas/06/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229535816_A/Texas/09/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229535985_A/Texas/08/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536075_A/Texas/07/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229368677_A/Denmark/513/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227831826_A/Texas/04/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227831774_A/Texas/05/2009       AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227831776_A/California/06/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227831759_A/California/05/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227977104_A/California/10/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536135_A/Colorado/03/200     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|228481046_A/Auckland/1/2009     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 158 gi|237624327_A/swine/Alberta/O     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229536010_A/Kansas/03/2009      AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|228495370_A/Regensburg/Germ     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 160 gi|229892706A/Mexico/InDRE4114     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229535949_A/California/04/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227809830_A/California/04/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|229299517_A/California/07/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|228017758_A/California/08/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 gi|227977172_A/California/07/2     AACPHAGAKSFYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPS 200 *************************************************

gi|229396357_A/New_York/12/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229892708_A/Canada-AB/RV153     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396399_A/New_York/18/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536064_A/New_York/20/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536055_A/New_York/20/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396487_A/New_York/19/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227977099_A/New_York/19/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396410_A/New_York/31/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396419_A/New_York/23/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396381_A/New_York/11/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396443_A/New_York/10/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229484031_A/Canada-ON/RV152     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229535797_A/New_York/22/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536129_A/New_York/13/200     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536100_A/Massachusetts/0     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229535909_A/Massachusetts/0     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229535834_A/California/14/2     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229892704_A/Canada-ON/RV152     TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229598877_A/Ohio/07/2009        TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396504_A/Ohio/07/2009        TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396494_A/Ohio/07/2009        TSADQQSLYQNADAYVFVGTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229892702_A/Canada-ON/RV152     TSADQQSLYQNADAYVFVGXSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229783398_A/New_York/1682/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|237511819_A/Mexico/4108/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536049_A/Arizona/02/2009     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536088_A/Indiana/09/2009     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229484027_A/Canada-NS/RV153     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229892700_A/Canada-NS/RV153     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229892710_A/Canada-NS/RV153     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|237511821_A/Mexico/4115/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|237511811_A/Mexico/4482/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|237511799_A/Mexico/4486/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|237511817_A/Mexico/4603/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|237511795_A/Mexico/4604/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229783367_A/Korea/01/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229783377_A/New_York/1669/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536022_A/Arizona/01/2009     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536003_A/Kansas/02/2009      TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536121_A/Michigan/02/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229598896_A/Texas/15/2009       TSADQQSLYQNADAYVFVGSSRYSKKLKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229609563_A/Catalonia/P154/     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 225 gi|229299521_A/Texas/04/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|228860929_A/Netherlands/602     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229484029_A/Mexico/InDRE448     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229535997_A/South_Carolina/     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229609557_A/Catalonia/P148/     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 226 gi|229299515_A/Texas/04/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229396467_A/Texas/06/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229535816_A/Texas/09/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229535985_A/Texas/08/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536075_A/Texas/07/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229368677_A/Denmark/513/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227831826_A/Texas/04/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227831774_A/Texas/05/2009       TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227831776_A/California/06/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227831759_A/California/05/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227977104_A/California/10/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536135_A/Colorado/03/200     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|228481046_A/Auckland/1/2009     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 208 gi|237624327_A/swine/Alberta/O     TSADQQSLYQNADANVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229536010_A/Kansas/03/2009      TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|228495370_A/Regensburg/Germ     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 210 gi|229892706A/Mexico/InDRE4114     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRGQEGRMNYYWTL 250 gi|229535949_A/California/04/2     TSADQQSLYQNADTYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227809830_A/California/04/2     TSADQQSLYQNADTYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|229299517_A/California/07/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|228017758_A/California/08/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQEGRMNYYWTL 250 gi|227977172_A/California/07/2     TSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRXXEGRMNYYWTL 250 *************: **** ******:*********** **********

gi|229396357_A/New_York/12/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229892708_A/Canada-AB/RV153     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396399_A/New_York/18/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536064_A/New_York/20/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536055_A/New_York/20/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396487_A/New_York/19/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227977099_A/New_York/19/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396410_A/New_York/31/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396419_A/New_York/23/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396381_A/New_York/11/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396443_A/New_York/10/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229484031_A/Canada-ON/RV152     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229535797_A/New_York/22/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536129_A/New_York/13/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536100_A/Massachusetts/0     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229535909_A/Massachusetts/0     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229535834_A/California/14/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229892704_A/Canada-ON/RV152     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229598877_A/Ohio/07/2009        VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396504_A/Ohio/07/2009        VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396494_A/Ohio/07/2009        VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229892702_A/Canada-ON/RV152     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229783398_A/New_York/1682/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCDTTCQTPK 300 gi|237511819_A/Mexico/4108/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536049_A/Arizona/02/2009     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536088_A/Indiana/09/2009     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229484027_A/Canada-NS/RV153     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229892700_A/Canada-NS/RV153     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229892710_A/Canada-NS/RV153     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|237511821_A/Mexico/4115/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|237511811_A/Mexico/4482/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|237511799_A/Mexico/4486/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|237511817_A/Mexico/4603/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|237511795_A/Mexico/4604/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229783367_A/Korea/01/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229783377_A/New_York/1669/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536022_A/Arizona/01/2009     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536003_A/Kansas/02/2009      VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536121_A/Michigan/02/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229598896_A/Texas/15/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229609563_A/Catalonia/P154/     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 275 gi|229299521_A/Texas/04/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|228860929_A/Netherlands/602     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229484029_A/Mexico/InDRE448     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229535997_A/South_Carolina/     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHECNTTCQTPK 300 gi|229609557_A/Catalonia/P148/     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHECNTTCQTPK 276 gi|229299515_A/Texas/04/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229396467_A/Texas/06/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229535816_A/Texas/09/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229535985_A/Texas/08/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536075_A/Texas/07/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229368677_A/Denmark/513/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227831826_A/Texas/04/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227831774_A/Texas/05/2009       VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227831776_A/California/06/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227831759_A/California/05/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227977104_A/California/10/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536135_A/Colorado/03/200     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|228481046_A/Auckland/1/2009     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 258 gi|237624327_A/swine/Alberta/O     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229536010_A/Kansas/03/2009      VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|228495370_A/Regensburg/Germ     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 260 gi|229892706A/Mexico/InDRE4114     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229535949_A/California/04/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227809830_A/California/04/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|229299517_A/California/07/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|228017758_A/California/08/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 gi|227977172_A/California/07/2     VEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK 300 ****************************************:*:*******

gi|229396357_A/New_York/12/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229892708_A/Canada-AB/RV153     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396399_A/New_York/18/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536064_A/New_York/20/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536055_A/New_York/20/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396487_A/New_York/19/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|227977099_A/New_York/19/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396410_A/New_York/31/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396419_A/New_York/23/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396381_A/New_York/11/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396443_A/New_York/10/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229484031_A/Canada-ON/RV152     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229535797_A/New_York/22/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536129_A/New_York/13/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536100_A/Massachusetts/0     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229535909_A/Massachusetts/0     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229535834_A/California/14/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229892704_A/Canada-ON/RV152     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229598877_A/Ohio/07/2009        GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396504_A/Ohio/07/2009        GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396494_A/Ohio/07/2009        GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229892702_A/Canada-ON/RV152     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229783398_A/New_York/1682/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|237511819_A/Mexico/4108/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536049_A/Arizona/02/2009     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536088_A/Indiana/09/2009     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229484027_A/Canada-NS/RV153     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229892700_A/Canada-NS/RV153     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229892710_A/Canada-NS/RV153     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|237511821_A/Mexico/4115/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|237511811_A/Mexico/4482/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|237511799_A/Mexico/4486/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|237511817_A/Mexico/4603/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|237511795_A/Mexico/4604/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229783367_A/Korea/01/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229783377_A/New_York/1669/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536022_A/Arizona/01/2009     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536003_A/Kansas/02/2009      GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536121_A/Michigan/02/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229598896_A/Texas/15/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229609563_A/Catalonia/P154/     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 325 gi|229299521_A/Texas/04/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|228860929_A/Netherlands/602     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229484029_A/Mexico/InDRE448     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229535997_A/South_Carolina/     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229609557_A/Catalonia/P148/     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 326 gi|229299515_A/Texas/04/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229396467_A/Texas/06/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229535816_A/Texas/09/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229535985_A/Texas/08/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536075_A/Texas/07/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229368677_A/Denmark/513/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|227831826_A/Texas/04/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|227831774_A/Texas/05/2009       GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|227831776_A/California/06/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|227831759_A/California/05/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|227977104_A/California/10/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536135_A/Colorado/03/200     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|228481046_A/Auckland/1/2009     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 308 gi|237624327_A/swine/Alberta/O     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229536010_A/Kansas/03/2009      GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|228495370_A/Regensburg/Germ     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 310 gi|229892706A/Mexico/InDRE4114     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAI 350 gi|229535949_A/California/04/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350 gi|227809830_A/California/04/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350 gi|229299517_A/California/07/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350 gi|228017758_A/California/08/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350 gi|227977172_A/California/07/2     GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNIPSIQSRGLFGAI 350 *************************************:************

gi|229396357_A/New_York/12/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229892708_A/Canada-AB/RV153     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396399_A/New_York/18/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536064_A/New_York/20/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536055_A/New_York/20/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396487_A/New_York/19/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227977099_A/New_York/19/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396410_A/New_York/31/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396419_A/New_York/23/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396381_A/New_York/11/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396443_A/New_York/10/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229484031_A/Canada-ON/RV152     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229535797_A/New_York/22/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536129_A/New_York/13/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536100_A/Massachusetts/0     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229535909_A/Massachusetts/0     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229535834_A/California/14/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229892704_A/Canada-ON/RV152     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229598877_A/Ohio/07/2009        AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396504_A/Ohio/07/2009        AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396494_A/Ohio/07/2009        AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229892702_A/Canada-ON/RV152     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229783398_A/New_York/1682/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|237511819_A/Mexico/4108/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536049_A/Arizona/02/2009     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536088_A/Indiana/09/2009     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229484027_A/Canada-NS/RV153     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVV 400 gi|229892700_A/Canada-NS/RV153     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVV 400 gi|229892710_A/Canada-NS/RV153     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVV 400 gi|237511821_A/Mexico/4115/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|237511811_A/Mexico/4482/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|237511799_A/Mexico/4486/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|237511817_A/Mexico/4603/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|237511795_A/Mexico/4604/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229783367_A/Korea/01/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229783377_A/New_York/1669/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536022_A/Arizona/01/2009     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536003_A/Kansas/02/2009      AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536121_A/Michigan/02/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229598896_A/Texas/15/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229609563_A/Catalonia/P154/     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 375 gi|229299521_A/Texas/04/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|228860929_A/Netherlands/602     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229484029_A/Mexico/InDRE448     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229535997_A/South_Carolina/     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229609557_A/Catalonia/P148/     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 376 gi|229299515_A/Texas/04/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229396467_A/Texas/06/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229535816_A/Texas/09/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229535985_A/Texas/08/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536075_A/Texas/07/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229368677_A/Denmark/513/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227831826_A/Texas/04/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227831774_A/Texas/05/2009       AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227831776_A/California/06/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227831759_A/California/05/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227977104_A/California/10/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536135_A/Colorado/03/200     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|228481046_A/Auckland/1/2009     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 358 gi|237624327_A/swine/Alberta/O     VGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229536010_A/Kansas/03/2009      AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|228495370_A/Regensburg/Germ     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 360 gi|229892706A/Mexico/InDRE4114     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229535949_A/California/04/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227809830_A/California/04/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|229299517_A/California/07/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|228017758_A/California/08/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 gi|227977172_A/California/07/2     AGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVI 400 .************************************************:

gi|229396357_A/New_York/12/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229892708_A/Canada-AB/RV153     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229396399_A/New_York/18/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536064_A/New_York/20/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536055_A/New_York/20/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229396487_A/New_York/19/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227977099_A/New_York/19/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229396410_A/New_York/31/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229396419_A/New_York/23/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229396381_A/New_York/11/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229396443_A/New_York/10/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229484031_A/Canada-ON/RV152     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229535797_A/New_York/22/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536129_A/New_York/13/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536100_A/Massachusetts/0     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229535909_A/Massachusetts/0     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229535834_A/California/14/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229892704_A/Canada-ON/RV152     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229598877_A/Ohio/07/2009        EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450 gi|229396504_A/Ohio/07/2009        EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450 gi|229396494_A/Ohio/07/2009        EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450 gi|229892702_A/Canada-ON/RV152     EKMNTQFTAVGKEFNHLEKRIENLNKKIDDGFLDIWTYNAELLVLLENER 450 gi|229783398_A/New_York/1682/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|237511819_A/Mexico/4108/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLILLENER 450 gi|229536049_A/Arizona/02/2009     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536088_A/Indiana/09/2009     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229484027_A/Canada-NS/RV153     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229892700_A/Canada-NS/RV153     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229892710_A/Canada-NS/RV153     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|237511821_A/Mexico/4115/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|237511811_A/Mexico/4482/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|237511799_A/Mexico/4486/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|237511817_A/Mexico/4603/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|237511795_A/Mexico/4604/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229783367_A/Korea/01/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229783377_A/New_York/1669/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536022_A/Arizona/01/2009     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536003_A/Kansas/02/2009      EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536121_A/Michigan/02/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229598896_A/Texas/15/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229609563_A/Catalonia/P154/     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 425 gi|229299521_A/Texas/04/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|228860929_A/Netherlands/602     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229484029_A/Mexico/InDRE448     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229535997_A/South_Carolina/     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229609557_A/Catalonia/P148/     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 426 gi|229299515_A/Texas/04/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229396467_A/Texas/06/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229535816_A/Texas/09/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229535985_A/Texas/08/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536075_A/Texas/07/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229368677_A/Denmark/513/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227831826_A/Texas/04/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227831774_A/Texas/05/2009       EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227831776_A/California/06/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227831759_A/California/05/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227977104_A/California/10/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536135_A/Colorado/03/200     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|228481046_A/Auckland/1/2009     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 408 gi|237624327_A/swine/Alberta/O     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229536010_A/Kansas/03/2009      EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|228495370_A/Regensburg/Germ     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 410 gi|229892706A/Mexico/InDRE4114     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229535949_A/California/04/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227809830_A/California/04/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|229299517_A/California/07/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|228017758_A/California/08/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 gi|227977172_A/California/07/2     EKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER 450 ***************************:***************:******

gi|229396357_A/New_York/12/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229892708_A/Canada-AB/RV153     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396399_A/New_York/18/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536064_A/New_York/20/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536055_A/New_York/20/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396487_A/New_York/19/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227977099_A/New_York/19/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396410_A/New_York/31/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396419_A/New_York/23/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396381_A/New_York/11/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396443_A/New_York/10/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229484031_A/Canada-ON/RV152     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229535797_A/New_York/22/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536129_A/New_York/13/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536100_A/Massachusetts/0     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229535909_A/Massachusetts/0     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229535834_A/California/14/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229892704_A/Canada-ON/RV152     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229598877_A/Ohio/07/2009        TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396504_A/Ohio/07/2009        TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396494_A/Ohio/07/2009        TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229892702_A/Canada-ON/RV152     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229783398_A/New_York/1682/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|237511819_A/Mexico/4108/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536049_A/Arizona/02/2009     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536088_A/Indiana/09/2009     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229484027_A/Canada-NS/RV153     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229892700_A/Canada-NS/RV153     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229892710_A/Canada-NS/RV153     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|237511821_A/Mexico/4115/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|237511811_A/Mexico/4482/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|237511799_A/Mexico/4486/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|237511817_A/Mexico/4603/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|237511795_A/Mexico/4604/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229783367_A/Korea/01/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229783377_A/New_York/1669/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536022_A/Arizona/01/2009     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536003_A/Kansas/02/2009      TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536121_A/Michigan/02/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229598896_A/Texas/15/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229609563_A/Catalonia/P154/     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 475 gi|229299521_A/Texas/04/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|228860929_A/Netherlands/602     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229484029_A/Mexico/InDRE448     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229535997_A/South_Carolina/     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229609557_A/Catalonia/P148/     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 476 gi|229299515_A/Texas/04/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229396467_A/Texas/06/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229535816_A/Texas/09/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229535985_A/Texas/08/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536075_A/Texas/07/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229368677_A/Denmark/513/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227831826_A/Texas/04/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227831774_A/Texas/05/2009       TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227831776_A/California/06/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227831759_A/California/05/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227977104_A/California/10/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536135_A/Colorado/03/200     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|228481046_A/Auckland/1/2009     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 458 gi|237624327_A/swine/Alberta/O     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229536010_A/Kansas/03/2009      TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|228495370_A/Regensburg/Germ     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 460 gi|229892706A/Mexico/InDRE4114     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229535949_A/California/04/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227809830_A/California/04/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|229299517_A/California/07/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|228017758_A/California/08/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 gi|227977172_A/California/07/2     TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGT 500 **************************************************

gi|229396357_A/New_York/12/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229892708_A/Canada-AB/RV153     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396399_A/New_York/18/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536064_A/New_York/20/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536055_A/New_York/20/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396487_A/New_York/19/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227977099_A/New_York/19/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396410_A/New_York/31/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396419_A/New_York/23/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396381_A/New_York/11/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396443_A/New_York/10/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229484031_A/Canada-ON/RV152     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229535797_A/New_York/22/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536129_A/New_York/13/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536100_A/Massachusetts/0     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229535909_A/Massachusetts/0     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229535834_A/California/14/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229892704_A/Canada-ON/RV152     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229598877_A/Ohio/07/2009        YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396504_A/Ohio/07/2009        YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396494_A/Ohio/07/2009        YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229892702_A/Canada-ON/RV152     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229783398_A/New_York/1682/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|237511819_A/Mexico/4108/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536049_A/Arizona/02/2009     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536088_A/Indiana/09/2009     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229484027_A/Canada-NS/RV153     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229892700_A/Canada-NS/RV153     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229892710_A/Canada-NS/RV153     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|237511821_A/Mexico/4115/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|237511811_A/Mexico/4482/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|237511799_A/Mexico/4486/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|237511817_A/Mexico/4603/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|237511795_A/Mexico/4604/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229783367_A/Korea/01/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229783377_A/New_York/1669/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536022_A/Arizona/01/2009     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536003_A/Kansas/02/2009      YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536121_A/Michigan/02/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229598896_A/Texas/15/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229609563_A/Catalonia/P154/     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 525 gi|229299521_A/Texas/04/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|228860929_A/Netherlands/602     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229484029_A/Mexico/InDRE448     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229535997_A/South_Carolina/     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229609557_A/Catalonia/P148/     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 526 gi|229299515_A/Texas/04/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229396467_A/Texas/06/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229535816_A/Texas/09/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229535985_A/Texas/08/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536075_A/Texas/07/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229368677_A/Denmark/513/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227831826_A/Texas/04/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227831774_A/Texas/05/2009       YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227831776_A/California/06/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227831759_A/California/05/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227977104_A/California/10/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536135_A/Colorado/03/200     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|228481046_A/Auckland/1/2009     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 508 gi|237624327_A/swine/Alberta/O     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229536010_A/Kansas/03/2009      YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|228495370_A/Regensburg/Germ     YDYPKYSEEAKLNREEIDGVK- 481 gi|229892706A/Mexico/InDRE4114     YDYPKYSEEAKLNREEIDGVKLESTRFYQILAIYSTVASSLVLVVSLGAI 550 gi|229535949_A/California/04/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227809830_A/California/04/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|229299517_A/California/07/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|228017758_A/California/08/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 gi|227977172_A/California/07/2     YDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAI 550 *********************

gi|229396357_A/New_York/12/200     SFWMCSNGSLQCRICI 566 gi|229892708_A/Canada-AB/RV153     SFWMCSNGSLQCRICI 566 gi|229396399_A/New_York/18/200     SFWMCSNGSLQCRICI 566 gi|229536064_A/New_York/20/200     SFWMCSNGSLQCRICI 566 gi|229536055_A/New_York/20/200     SFWMCSNGSLQCRICI 566 gi|229396487_A/New_York/19/200     SFWMCSNGSLQCRICI 566 gi|227977099_A/New_York/19/200     SFWMCSNGSLQCRICI 566 gi|229396410_A/New_York/31/200     SFWMCSNGSLQCRICI 566 gi|229396419_A/New_York/23/200     SFWMCSNGSLQCRICI 566 gi|229396381_A/New_York/11/200     SFWMCSNGSLQCRICI 566 gi|229396443_A/New_York/10/200     SFWMCSNGSLQCRICI 566 gi|229484031_A/Canada-ON/RV152     SFWMCSNGSLQCRICI 566 gi|229535797_A/New_York/22/200     SFWMCSNGSLQCRICI 566 gi|229536129_A/New_York/13/200     SFWMCSNGSLQCRICI 566 gi|229536100_A/Massachusetts/0     SFWMCSNGSLQCRICI 566 gi|229535909_A/Massachusetts/0     SFWMCSNGSLQCRICI 566 gi|229535834_A/California/14/2     SFWMCSNGSLQCRICI 566 gi|229892704_A/Canada-ON/RV152     SFWMCSNGSLQCRICI 566 gi|229598877_A/Ohio/07/2009        SFWMCSNGSLQCRICI 566 gi|229396504_A/Ohio/07/2009        SFWMCSNGSLQCRICI 566 gi|229396494_A/Ohio/07/2009        SFWMCSNGSLQCRICI 566 gi|229892702_A/Canada-ON/RV152     SFWMCSNGSLQCRICI 566 gi|229783398_A/New_York/1682/2     SFWMCSNGSLQCRICI 566 gi|237511819_A/Mexico/4108/200     SFWMCSNGSLQCRICI 566 gi|229536049_A/Arizona/02/2009     SFWMCSNGSLQCRICI 566 gi|229536088_A/Indiana/09/2009     SFWMCSNGSLQCRICI 566 gi|229484027_A/Canada-NS/RV153     SFWMCSNGSLQCRICI 566 gi|229892700_A/Canada-NS/RV153     SFWMCSNGSLQCRICI 566 gi|229892710_A/Canada-NS/RV153     SFWMCSNGSLQCRICI 566 gi|237511821_A/Mexico/4115/200     SFWMCSNGSLQCRICI 566 gi|237511811_A/Mexico/4482/200     SFWMCSNGSLQCRICI 566 gi|237511799_A/Mexico/4486/200     SFWMCSNGSLQCRICI 566 gi|237511817_A/Mexico/4603/200     SFWMCSNGSLQCRICI 566 gi|237511795_A/Mexico/4604/200     SFWMCSNGSLQCRICI 566 gi|229783367_A/Korea/01/2009       SFWMCSNGSLQCRICI 566 gi|229783377_A/New_York/1669/2     SFWMCSNGSLQCRICI 566 gi|229536022_A/Arizona/01/2009     SFWMCSNGSLQCRICI 566 gi|229536003_A/Kansas/02/2009      SFWMCSNGSLQCRICI 566 gi|229536121_A/Michigan/02/200     SFWMCSNGSLQCRICI 566 gi|229598896_A/Texas/15/2009       SFWMCSNGSLQCRICI 566 gi|229609563_A/Catalonia/P154/     SFWMCSNG 533 gi|229299521_A/Texas/04/2009       SFWMCSNGSLQCRICI 566 gi|228860929_A/Netherlands/602     SFWMCSNGSLQCRICI 566 gi|229484029_A/Mexico/InDRE448     SFWMCSNGSLQCRICI 566 gi|229535997_A/South_Carolina/     SFWMCSNGSLQCRICI 566 gi|229609557_A/Catalonia/P148/     SFWMCSNG 534 gi|229299515_A/Texas/04/2009       SFWMCSNGSLQCRICI 566 gi|229396467_A/Texas/06/2009       SFWMCSNGSLQCRICI 566 gi|229535816_A/Texas/09/2009       SFWMCSNGSLQCRICI 566 gi|229535985_A/Texas/08/2009       SFWMCSNGSLQCRICI 566 gi|229536075_A/Texas/07/2009       SFWMCSNGSLQCRICI 566 gi|229368677_A/Denmark/513/200     SFWMCSNGSLQCRICI 566 gi|227831826_A/Texas/04/2009       SFWMCSNGSLQCRICI 566 gi|227831774_A/Texas/05/2009       SFWMCSNGSLQCRICI 566 gi|227831776_A/California/06/2     SFWMCSNGSLQCRICI 566 gi|227831759_A/California/05/2     SFWMCSNGSLQCRICI 566 gi|227977104_A/California/10/2     SFWMCSNGSLQCRICI 566 gi|229536135_A/Colorado/03/200     SFWMCSNGSLQCRICI 566 gi|228481046_A/Auckland/1/2009     SFWMCSNGSLQCRICI 524 gi|237624327_A/swine/Alberta/O     SFWMCSNGSLQCRICI 566 gi|229536010_A/Kansas/03/2009      SFWMCSNGSLQCRICI 566 gi|228495370_A/Regensburg/Germ gi|229892706A/Mexico/InDRE4114     SFWMCSNGSLQCRICI 566 gi|229535949_A/California/04/2     SFWMCSNGSLQCRICI 566 gi|227809830_A/California/04/2     SFWMCSNGSLQCRICI 566 gi|229299517_A/California/07/2     SFWMCSNGSLQCRICI 566 gi|228017758_A/California/08/2     SFWMCSNGSLQCRICI 566 gi|227977172_A/California/07/2     SFWMCSNGSLQCRICI 566

BLAST
>gb|ABQ42446.1| hemagglutinin [Influenza A virus (A/swine/Guangxi/17/2005(H1N2))] Length=566

Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 543/566 (95%), Positives = 558/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFIDYEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFIDYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHDSN+GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDSNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLW IHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWSIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAIKRNSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGA+SFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAVSFWMCSNGSLQCRICI  566

>gb|AAL87865.1|AF455675_1 hemagglutinin [Influenza A virus (A/Swine/Ohio/891/01(H1N2))] Length=566

Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/566 (95%), Positives = 559/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGAKSFY+NLIWLVKKGNSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGAKSFYRNLIWLVKKGNSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|AAF75994.1|AF250124_1 hemagglutinin [influenza A virus (A/Swine/Indiana/9K035/99 (H1N2))] Length=566

Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 541/566 (95%), Positives = 558/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKGNSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL87870.1|AF455680_1 hemagglutinin [Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2))] Length=566

Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/566 (95%), Positives = 557/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETSSSDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSSSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP+AGAKSFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPYAGAKSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GR+NYYWTLVEPGDKITFEATGNLVVPRYAFAMERN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  AGRINYYWTLVEPGDKITFEATGNLVVPRYAFAMERNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQF AVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFIAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELL+LLENERTLDYHDSNVKNLYEKVRSQLKNNA+EIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLILLENERTLDYHDSNVKNLYEKVRSQLKNNAREIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+ CMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDKCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ABV25639.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/1192/2001(H1N2))] Length=566

Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/566 (95%), Positives = 556/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTTSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+++GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDADRGVTAACPHAGASSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWT+VEPGDKITFEATGNLVVPRYAFAM+RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  AGRMNYYWTIVEPGDKITFEATGNLVVPRYAFAMKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHPITIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPITIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDY KYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYSKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL29710.1| hemagglutinin [Influenza A virus (A/SW/MN/23124-T/01(H1N2))] gb|AAL29711.1| hemagglutinin [Influenza A virus (A/SW/MN/23124-S/01(H1N2))] Length=566

Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/566 (95%), Positives = 557/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKGNSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNH E+R Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHPERR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ABQ42444.1| hemagglutinin [Influenza A virus (A/swine/Guangxi/13/2006(H1N2))] Length=566

Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/566 (95%), Positives = 557/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTASADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFIDYEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFIDYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWP+HDSN+GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPDHDSNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHP TSA+QQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPPTSANQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFAM+RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LE+R Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLERR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL+REEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLHREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQC+ICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCKICI  566

>gb|ABV25641.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/00194/2003(H1N2))] Length=566

Score = 1131 bits (2926), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/566 (94%), Positives = 556/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNG CYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGACYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAG SFY+NLIWLVKKGNSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGTNSFYRNLIWLVKKGNSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYS+KF+PEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSRKFEPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNT CQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTACQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKN+YEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNIYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL29713.1| hemagglutinin [Influenza A virus (A/SW/MN/16419/01(H1N2))] Length=566

Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/566 (94%), Positives = 555/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE +HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEGRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAG SFY+NLIWLVKKGNSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGTNSFYRNLIWLVKKGNSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNT CQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTICQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRIC+ Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICM  566

>gb|AAL87871.1|AF455681_1 hemagglutinin [Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2))] Length=566

Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/566 (94%), Positives = 556/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLH+GKCNIAGW+LGNPECESL TASSWSYIVETS+S+NGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHMGKCNIAGWLLGNPECESLFTASSWSYIVETSNSENGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKG+SYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGDSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGS RYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSLRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT V+DCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVYDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQF AVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFKAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ACH69547.1| hemagglutinin [Influenza A virus (A/swine/OH/511445/2007(H1N1))] Length=566

Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/566 (93%), Positives = 556/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE++HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESLSTASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLSTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACPHAG SFY+NLIWLVKKGNSYPK++K Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPHAGTNSFYRNLIWLVKKGNSYPKINK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLW IHHPSTSADQQSLYQNADAYVFVGSSRYS+KF+PEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWAIHHPSTSADQQSLYQNADAYVFVGSSRYSRKFEPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDC+TTCQTP Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCDTTCQTPN  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLE+R Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLERR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|AAK71687.1| hemagglutinin [Influenza A virus (A/Turkey/MO/24093/99(H1N2))] Length=566

Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/566 (94%), Positives = 552/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFP+TSSWPNHD+N+GVTAACPHAGA SFY+NLIWL KKG+SYPKLSK Sbjct 121  QLSSVSSFERFEIFPETSSWPNHDTNRGVTAACPHAGANSFYRNLIWLAKKGDSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHP TSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFAM+RN+ SGIIISD VHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMKRNSESGIIISDISVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFT VGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTVVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLG ISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGTISFWMCSNGSLQCRICI  566

>gb|AAL87872.1|AF455682_1 hemagglutinin [Influenza A virus (A/Swine/Illinois/100084/01 (H1N2))] Length=566

Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/566 (94%), Positives = 553/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLH+GKCNIAGW+LGNPECESL TASSWSYIVETS+S+NGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHMGKCNIAGWLLGNPECESLFTASSWSYIVETSNSENGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSV SFERFEIFPKTSSWPNHD+N+GVTAACPHAGA SFY+NLIWLVKKGNSYPK+SK Sbjct 121  QLSSVLSFERFEIFPKTSSWPNHDTNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQN DAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNEDAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT HDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSAHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+A GLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMARGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQF AVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFKAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ABV25642.1| hemagglutinin [Influenza A virus (A/swine/Kansas/00246/2004(H1N2))] Length=566

Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/566 (93%), Positives = 555/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDT+LEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTILEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TA SWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTARSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFP TSSWPNHD+N+GVTAACPHAG KSFY+NLIWLVKKG+SYPK+SK Sbjct 121  QLSSVSSFERFEIFPNTSSWPNHDTNRGVTAACPHAGTKSFYRNLIWLVKKGDSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSS+YSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSKYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRM+YYWT+VEPGDKITFEATGNLVVPRYAF ++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMDYYWTIVEPGDKITFEATGNLVVPRYAFELKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKV+SQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVKSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+ CMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDMCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLIVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77934.1| hemagglutinin [Influenza A virus (A/swine/Korea/PZ4/2006(H1N2))] Length=566

Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/566 (93%), Positives = 555/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77935.1| hemagglutinin [Influenza A virus (A/swine/Korea/PZ7/2006(H1N2))] gb|ACE77936.1| hemagglutinin [Influenza A virus (A/swine/Korea/PZ14/2006(H1N2))] Length=566

Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/566 (93%), Positives = 555/566 (98%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFP+TSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPRTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL87867.1|AF455677_1 hemagglutinin [Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2))] Length=565

Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/566 (94%), Positives = 553/566 (97%), Gaps = 1/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TA ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTAKADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTS WPNHD+N+GVTAACPHAGA SFY+NLIWLV+K NSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTS-WPNHDTNRGVTAACPHAGANSFYRNLIWLVEKENSYPKLSK  179

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K EVLVLWGIHHPSTSADQ+SLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ Sbjct 180  SYINNKEMEVLVLWGIHHPSTSADQRSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  239

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGDKITFEATGNLVVPRYAFAM+R +GSGIIISDT VHDCNTTCQTPK Sbjct 240  AGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMKRGSGSGIIISDTSVHDCNTTCQTPK  299

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 300  GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  359

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 360  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  419

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 420  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  479

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 480  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  539

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 540  LVLVVSLGAISFWMCSNGSLQCRICI  565

>gb|ABW71521.1| hemagglutinin [Influenza A virus (A/swine/Iowa/24297/1991(H1N1))] Length=566

Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/566 (93%), Positives = 552/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77937.1| hemagglutinin [Influenza A virus (A/swine/Korea/CY08/2007(H1N2))] Length=566

Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/566 (93%), Positives = 554/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFP+TSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPRTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ABG34254.1| hemagglutinin [Influenza A virus (A/swine/Korea/S11/2005(H1N2))] Length=566

Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/566 (93%), Positives = 552/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTFATAN+DTLCIGYHANNSTDTVDT+LE+N+TVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFATANSDTLCIGYHANNSTDTVDTILERNITVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNP CESL TASSWSYIVE S+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPGCESLFTASSWSYIVEKSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTA+CPHAG KSFY+NLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTASCPHAGTKSFYRNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN K KEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIA RPKVRDQ Sbjct 181  SYINSKEKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWT+VEPGDKITFEATGNLVVPRYA A++RN+GSGIIISDT VHD NT CQTPK Sbjct 241  EGRMNYYWTIVEPGDKITFEATGNLVVPRYALALKRNSGSGIIISDTSVHDGNTACQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID ITNKVNSVIEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREE+DGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEVDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGA SFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGATSFWMCSNGSLQCRICI  566

>gb|ACE77931.1| hemagglutinin [Influenza A virus (A/swine/Korea/JL02/2005(H1N2))] Length=566

Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/566 (93%), Positives = 553/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLITASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFP+TSSWPNH++++GVTAACPHAG SFYKNLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPRTSSWPNHNTDRGVTAACPHAGTSSFYKNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ +LYQNADAYVFVGSSRYSKKF PEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQLTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR29565.1| hemagglutinin [Influenza A virus (A/swine/Maryland/23239/1991(H1N1))] gb|ACI26604.1| hemagglutinin [Influenza A virus (A/swine/Memphis/1/1990(H1N1))] Length=566

Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACF25596.1| hemagglutinin [Influenza A virus (A/turkey/IA/21089-3/1992(H1N1))] Length=566

Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR29585.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/1915/1988(H1N1))] Length=566

Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/566 (92%), Positives = 551/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQG+GYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGTGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77929.1| hemagglutinin [Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2))] Length=566

Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+ IG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVXIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR29595.1| hemagglutinin [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))] gb|ACD88703.1| hemagglutinin [Influenza A virus (A/turkey/NC/19762/1988(H1N1))] Length=566

Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABU80400.1| hemagglutinin [Influenza A virus (A/Ohio/3559/1988(H1N1))] Length=566

Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLN+KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNRKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77933.1| hemagglutinin [Influenza A virus (A/swine/Korea/Asan04/2006(H1N2))] Length=566

Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 526/566 (92%), Positives = 551/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWL+KK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLIKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFVGSSRYSKKF PEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVGSSRYSKKFTPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77932.1| hemagglutinin [Influenza A virus (A/swine/Korea/JL04/2005(H1N2))] Length=566

Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/566 (93%), Positives = 551/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ++LYQNADAYVFV SSRYSKKF PEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQRTLYQNADAYVFVESSRYSKKFTPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77930.1| hemagglutinin [Influenza A virus (A/swine/Korea/JL01/2005(H1N2))] Length=566

Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/566 (93%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVETS+ DNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLIAASSWSYIVETSNPDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNHD+N+GVTAACP AG SFYKNLIWLVKK NSYPK+SK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHDTNRGVTAACPLAGTNSFYKNLIWLVKKENSYPKISK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPS SADQ +LYQNADAYVFVGSSRYSKKF PEI RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPSNSADQLTLYQNADAYVFVGSSRYSKKFTPEITTRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFA++RN+GSGIIISDT VHDCNTTCQTPK Sbjct 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFALKRNSGSGIIISDTSVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRNVPSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAI+ ITNKVNS+IEKMNTQFTAVGKEF+HLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAINGITNKVNSIIEKMNTQFTAVGKEFSHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKL RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLTREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLVVSLGAISFWMCSNGSLQCRICI  566

>gb|AAA43283.1| hemagglutinin [Influenza A virus (A/MD/12/1991(H1N1))] Length=566

Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWP+H++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPDHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAB03291.1| hemagglutinin [Influenza A virus (A/WI/4754/1994(H1N1))] gb|AAB03292.1| hemagglutinin [Influenza A virus (A/WI/4755/1994(H1N1))] Length=566

Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLSVSLGAISFWMCSNGSLQCRICI  566

>gb|ABY84684.1| hemagglutinin [Influenza A virus (A/swine/California/T9001707/1991(H1N1))] Length=566

Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/566 (93%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYT TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTVTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAF87280.1|AF222032_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/235/97(H1N1))] gb|AAF87281.1|AF222033_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/238/97(H1N1))] Length=566

Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 523/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L+G+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LKGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVT+ACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTSACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGK+VLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q Sbjct 181  SYINNKGKKVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAMER GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMERGYGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKV+SQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVKSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYST+ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTIASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR29575.1| hemagglutinin [Influenza A virus (A/swine/Kansas/3228/1987(H1N1))] gb|ABU80420.1| hemagglutinin [Influenza A virus (A/swine/Kansas/3024/1987(H1N1))] Length=566

Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 523/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACN50264.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/3/2005(H1N1))] Length=566

Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILV LLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVFLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFE+FPK+SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEMFPKSSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TSADQQSLYQNADAYVFVGSS+Y+KKF+PEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSKYNKKFRPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKST LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTNLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESV+NGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVRNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACI41022.1| hemagglutinin [Influenza A virus (A/turkey/NC/17026/1988(H1N1))] Length=566

Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAY56898.1| hemagglutinin [Influenza A virus (A/swine/Guangdong/2/01(H1N1))] gb|ACA25338.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/2/2005(H1N1))] Length=566

Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILV LLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVFLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFE+FPK+SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEMFPKSSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TSADQQSLYQNADAYVFVGSS+Y+KKF+PEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSKYNKKFRPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  TGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKST LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTNLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESV+NGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVRNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAF87276.1|AF222028_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/163/97(H1N1))] gb|AAF87279.1|AF222031_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/168/97(H1N1))] gb|AAF87282.1|AF222034_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/457/98(H1N1))] Length=566

Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIASRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID +TNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGVTNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 L+L+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LILLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAA19934.1| hemagglutinin [Influenza A virus (A/swine/St-Hyacinthe/106/1991(H1))] Length=566

Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/566 (91%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECESLST SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECESLSTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+G TAACP+AGA SFY+NLIWLVKKGNSYPKL+K Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGTTAACPYAGANSFYRNLIWLVKKGNSYPKLNK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHPSTS +QQSLYQNAD YVFVGSS+Y+KKFKPEIA RPKVRDQ Sbjct 181  SYVNNKGKEVLVLWGIHHPSTSNEQQSLYQNADTYVFVGSSKYNKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYH+CDN CMESVKNGTYDYPKYSEE++LNREEIDG+KL+STRIYQILAIYSTVASS Sbjct 481  CFEFYHRCDNACMESVKNGTYDYPKYSEESRLNREEIDGIKLDSTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>sp|P26140.1|HEMA_I88A6 RecName: Full=Hemagglutinin; Contains: RecName: Full=Hemagglutinin HA1 chain; Contains: RecName: Full=Hemagglutinin HA2 chain; Flags: Precursor pir||HMIV17 hemagglutinin precursor - influenza A virus (strain A/Swine/ Indiana/1726/88 [H1N1]) gb|ABF71860.1| haemagglutinin [Influenza A virus (A/Swine/Indiana/1726/1988(H1N1))] Length=566

Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYP YSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPNYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLSVSLGAISFWMCSNGSLQCRICI  566

>gb|ABS50121.1| hemagglutinin [Influenza A virus (A/swine/Iowa/31483/1988(H1N1))] Length=566

Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNA+D ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAVDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLN+KVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNRKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR29605.1| hemagglutinin [Influenza A virus (A/swine/Iowa/3/1985(H1N1))] gb|ABR29615.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1985(H1N1))] gb|ABW86596.1| hemagglutinin [Influenza A virus (A/swine/Iowa/2/1985(H1N1))] Length=566

Score = 1110 bits (2870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABS50111.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1987(H1N1))] Length=566

Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTP+ Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPE  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST+ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTIASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABK57092.1| hemagglutinin [Influenza A virus (A/Philippines/344/2004(H1N2))] Length=566

Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKA LVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKATLVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TA SWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLLTARSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWL KKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLTKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVG+S+Y+KKF PEIA RPKVRDQ Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGTSKYNKKFNPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD PVHDCNTTCQTP+ Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDAPVHDCNTTCQTPR  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLN+KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNRKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYP+YSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPRYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAF87278.1|AF222030_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/166/97(H1N1))] Length=566

Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIASRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID +TNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGVTNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENER LDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERALDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 L+L+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LILLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL87869.1|AF455679_1 hemagglutinin [Influenza A virus (A/Swine/Iowa/930/01(H1N2))] Length=566

Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKAILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNHD+NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHDTNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAERPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVN VIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNPVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAF87277.1|AF222029_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/164/97(H1N1))] Length=566

Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/566 (92%), Positives = 550/566 (97%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWP+H++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPDHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIASRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID +TNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGVTNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 L+L+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LILLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAN46827.1| hemagglutinin [Influenza A virus (A/Swine/Korea/CY02/02(H1N2))] Length=566

Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKAILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNHD+NKGVTAACPHAGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  HLSSVSSFERFEIFPKVNSWPNHDTNKGVTAACPHAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YS++FKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQALYQNADAYVFVGSSKYSRRFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQS+GLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSKGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSV+EKMNTQFTAVGKEFN LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVVEKMNTQFTAVGKEFNQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IEGLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABB86946.1| hemagglutinin [Influenza A virus (A/swine/Ontario/11112/04(H1N1))] Length=566

Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/566 (91%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECESLST SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECESLSTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+G TAACP+AGA SFY+NLIWLVKKGNSYPKL+K Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGTTAACPYAGANSFYRNLIWLVKKGNSYPKLNK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHPSTS +QQSLYQNAD YVFVGSS+Y+KKFKPEIA RPKVRDQ Sbjct 181  SYVNNKGKEVLVLWGIHHPSTSNEQQSLYQNADTYVFVGSSKYNKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+ CMESVKNGTYDYPKYSEE++LNREEIDG+KL+STRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDACMESVKNGTYDYPKYSEESRLNREEIDGIKLDSTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 VL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  SVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABV25638.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/37866/1999(H1N1))] Length=566

Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLY F TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKAILVVLLYAFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEEKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGWILGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWILGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPN+++++GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNYETSRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+YSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKEKEVLVLWGIHHPSTSTDQQSLYQNADAYVFVGSSKYSKKFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDT VHDCNT CQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTSVHDCNTNCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKS KLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSKKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQ+AID ITNKVNS+IEKMN+QFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQSAIDGITNKVNSIIEKMNSQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLN+KVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNRKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLEST +YQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTEVYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABV25640.1| hemagglutinin [Influenza A virus (A/swine/North Carolina/36883/2002(H1N1))] Length=566

Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 522/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MK ILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKTILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNHD++KGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHDTDKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKEFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDKPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL29712.1| hemagglutinin [Influenza A virus (A/SW/MO/1877/01(H1N2))] Length=566

Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/566 (92%), Positives = 549/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKAILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNHD+NKGVTAACP+AGA SFY+NLIWLVKKG+SYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHDTNKGVTAACPYAGASSFYRNLIWLVKKGDSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSNDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEFN LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFNQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENE+TLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENEKTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAR90881.2| hemagglutinin [Influenza A virus (A/swine/Pingtung/92-2/2003(H1N2))] Length=566

Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/566 (90%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF ANADTLCIGYHANNSTDTVDT+LEKN+TVTHSVNLLEDKHNGKLCK Sbjct 1    MKAILVVLLYTFTAANADTLCIGYHANNSTDTVDTLLEKNITVTHSVNLLEDKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TA SWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGMAPLHLGKCNIAGWLLGNPECEPLFTAKSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++NKGVTAACPHAGA SFY+NLIWLVKKGNSYPKL+K Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNKGVTAACPHAGANSFYRNLIWLVKKGNSYPKLNK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y+KK KPEIA RPKVRDQ Sbjct 181  SYVNNKGKEVLVLWGIHHPSTSNDQQSLYQNADAYVFVGSSKYNKKLKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GR+NYYWTLVEPGD ITFEATGNL+VPRYAFAM R++GSGIIISD PVHDCN TCQTPK Sbjct 241  AGRINYYWTLVEPGDTITFEATGNLIVPRYAFAMNRDSGSGIIISDAPVHDCNATCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTS PFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSHPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSG+AAD KSTQNAID ITNK+NSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGFAADRKSTQNAIDGITNKINSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 +ENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  VENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCDNTCMESVKNGTYDYP+YSEE+KLNREEI+GVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDNTCMESVKNGTYDYPRYSEESKLNREEIEGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACA25337.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/1/2005(H1N1))] Length=566

Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/566 (92%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTFA A ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYTFAAAKADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFE+FPK+SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEMFPKSSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHP TSADQQSLYQNADAYVFVGSS+Y+KKF+PEIA RPKVR Q Sbjct 181  SYINNKEKEVLVLWGIHHPPTSADQQSLYQNADAYVFVGSSKYNKKFRPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  TGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKST LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTNLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESV+NGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVRNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGA+SFWMCSNGSLQCRI I Sbjct 541  LVLLVSLGAVSFWMCSNGSLQCRIYI  566

>gb|AAF87275.1|AF222027_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/136/97(H1N1))] Length=566

Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE++HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L+GVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LKGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK +SWPNH++N+GVT+ACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKANSWPNHETNRGVTSACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPPTSNDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLV PRYAFAMER +GSGIIISDTPVHDCN TCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMERGSGSGIIISDTPVHDCNATCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINT+LPFQNIHP+TIG+CPKYVKST+LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTNLPFQNIHPVTIGECPKYVKSTRLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMES+KNGTYDYPKYSEEAKL REEIDGVKLESTRIYQILAIYST+ASS Sbjct 481  CFEFYHKCDDTCMESIKNGTYDYPKYSEEAKLTREEIDGVKLESTRIYQILAIYSTIASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABX58646.1| hemagglutinin [Influenza A virus (A/swine/Iowa/2/1987(H1N1))] Length=566

Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKL+STRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLDSTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAF87283.1|AF222035_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/458/98(H1N1))] Length=566

Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLY F TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYAFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L+GVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LKGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVT+ACP++GA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTSACPYSGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLV PRYAFAMER +GSGIIISDTPV+DCNT CQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMERGSGSGIIISDTPVYDCNTACQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYA D KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAPDRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFL++WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLNVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEA+LNREEIDGVKLESTRIYQILAIYST+ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEARLNREEIDGVKLESTRIYQILAIYSTIASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77928.1| hemagglutinin [Influenza A virus (A/swine/Korea/CAS08/2005(H1N1))] Length=566

Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTFATA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKAILVVLLYTFATADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNHD++KGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHDTDKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAF M+R +GSGII+SD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFPMKRGSGSGIIVSDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+ LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL29715.1| hemagglutinin [Influenza A virus (A/SW/MN/17138/01(H1N2))] Length=566

Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+V LYTF ANADTLCIGYHANNST+TVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVSLYTFTAANADTLCIGYHANNSTETVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYP LSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPTLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP T+ DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTNTDQQSLYQNADAYVFVGSSKYNKKFKPEIAPRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTP+HDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPIHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAADLKSTQNAID IT KVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADLKSTQNAIDGITTKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMES+KNG YDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESIKNGIYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL29709.1| hemagglutinin [Influenza A virus (A/SW/CO/17871/01(H1N2))] Length=566

Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/566 (91%), Positives = 547/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNH++NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHETNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLV PRYAFAM+R +GSGI+ISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMKRGSGSGIVISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQ+AID ITNKVNSVIEKMNTQFTAVGKEFN LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQSAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABV25643.1| hemagglutinin [Influenza A virus (A/swine/Iowa/00239/2004(H1N1))] Length=566

Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAI+VVLLYTFATA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KH+GKLCK Sbjct 1    MKAIIVVLLYTFATADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHDGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNHD+NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHDTNKGVTAACPYAGASSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRM+YYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGII+SD PVHDCNTTCQTPK Sbjct 241  AGRMDYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIVSDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+ LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLES RIYQILAIYSTVASS Sbjct 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESARIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGA+SFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAVSFWMCSNGSLQCRICI  566

>gb|ABD85123.1| hemagglutinin [Influenza A virus (A/swine/Taiwan/CO935/2004(H1N2))] gb|ABD85261.1| hemagglutinin [Influenza A virus (A/swine/Taiwan/CO935/2004(H1N2))] Length=566

Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDT+LEKNVTVTHSVNLLEDKHNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTLLEKNVTVTHSVNLLEDKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECE L TA SWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECEPLFTAKSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y+K+FKPEIA RPKVRDQ Sbjct 181  SYVNNKGKEVLVLWGIHHPSTSNDQQSLYQNADAYVFVGSSKYNKRFKPEIATRPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNL+VPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLIVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTS PFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSHPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSG+AAD KSTQNAID ITNK+NSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGFAADRKSTQNAIDGITNKINSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 +ENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  VENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCDNTCMESVKNGTYDYP+YSEE+KLNREEI+GVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDNTCMESVKNGTYDYPRYSEESKLNREEIEGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVLVVSLGAISFWMCSNGSL RICI Sbjct 541  LVLVVSLGAISFWMCSNGSLHGRICI  566

>gb|AAO65612.1| hemagglutinin [Influenza A virus (A/duck/NC/91347/01(H1N2))] Length=566

Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/566 (92%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MK ILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKTILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSV SFERFEIFPK +SWPNHD++KGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  HLSSVLSFERFEIFPKANSWPNHDTDKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKKFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDKPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAF87274.1|AF222026_1 hemagglutinin [Influenza A virus (A/Swine/Wisconsin/125/97(H1N1))] Length=566

Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE++HNGKLCK Sbjct 1    MKAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L+GVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LKGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK +SWPNH++N+GVT+ACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKANSWPNHETNRGVTSACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKF PEIA RPKVR Q Sbjct 181  SYINNKGKEVLVLWGIHHPPTSNDQQSLYQNADAYVFVGSSKYNKKFMPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLV PRYAFAMER +GSGIIISDTPVHDCN TCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVAPRYAFAMERGSGSGIIISDTPVHDCNATCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINT+LPFQNIHP+TIG+CPKYVKST+LR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTNLPFQNIHPVTIGECPKYVKSTRLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 I+NLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IKNLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMES+KNGTYDYPKYSEEAKL REEIDGVKLESTRIYQILAIYST+ASS Sbjct 481  CFEFYHKCDDTCMESIKNGTYDYPKYSEEAKLTREEIDGVKLESTRIYQILAIYSTIASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACI26329.1| hemagglutinin [Influenza A virus (A/X-53A(Puerto Rico/8/1934-New Jersey/11/1976)(H1N1))] Length=566

Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/566 (91%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLLTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNT CQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTKCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD +STQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQRSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28636.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/5892-7/1979(H1N1))] Length=566

Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACPHAGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPHAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQ+SLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQESLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDVPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLEST+IYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTKIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28713.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/11/1980(H1N1))] Length=566

Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYH+CD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHRCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABQ42448.1| hemagglutinin [Influenza A virus (A/swine/Hainan/1/2005(H1N2))] Length=566

Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/566 (91%), Positives = 548/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLY F  NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYAFTRGNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+KGKEVLVLWGIHHPST+ DQQSLYQNAD YVFV +S+YSKKFKPEIA RPKVRDQ Sbjct 181  SYINNKGKEVLVLWGIHHPSTNTDQQSLYQNADTYVFVVTSKYSKKFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVH+C+TTCQTPK Sbjct 241  AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHNCSTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNV+NLYEKVR+QLKNNAKEIGNG Sbjct 421  IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVRNLYEKVRNQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CF+FYHKCD+TCMESVKNGTYDYPKY+EEAKLNR+EIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFKFYHKCDDTCMESVKNGTYDYPKYTEEAKLNRKEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL29714.1| hemagglutinin [Influenza A virus (A/SW/MN/34893/01(H1N2))] Length=566

Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/566 (91%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 M+AILVVLLYTF TANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MEAILVVLLYTFTTANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+ PLHLGKCNIAGW+LGNPEC SL TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIDPLHLGKCNIAGWLLGNPECGSLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++NKGVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNKGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY N+ KEVLVLWGIHHPSTS DQQSLYQN DAYVFVGSS YSKKFKPEIA RPKVRDQ Sbjct 181  SYTNNMEKEVLVLWGIHHPSTSTDQQSLYQNTDAYVFVGSSTYSKKFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISD +HDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDASIHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIGKCPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGKCPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 MVDGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVN VIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MVDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNPVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEF HKCD+TCMESV+NGTYDYPKYSEEAKL+RE+IDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFCHKCDDTCMESVRNGTYDYPKYSEEAKLSREKIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 ++L+VSLGAISFWMCSNGSLQCRICI Sbjct 541  MILLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28658.1| hemagglutinin [Influenza A virus (A/swine/Ontario/4/1981(H1N1))] gb|ABW36355.1| hemagglutinin [Influenza A virus (A/swine/Ontario/6/1981(H1N1))] Length=566

Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMSRGSGSGIIISDTPIHDCDTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|AAL87868.1|AF455678_1 hemagglutinin [Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2))] Length=566

Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/566 (91%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MK ILVVLLYTF TA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKTILVVLLYTFTTADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECESL ASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECESLFEASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNHD++ GVTA+CP+AGAKSFY+NLIWLVKKG+SYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHDTDSGVTASCPYAGAKSFYRNLIWLVKKGSSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYINDK KEVLV+WGIHHP S DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVRDQ Sbjct 181  SYINDKKKEVLVIWGIHHPPNSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRDQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMTRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKL++ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLKMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFN LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABY81426.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1986(H1N1))] Length=566

Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/566 (91%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVT ACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTVACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNAD+YVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADSYVFVGSSKYNKKFKPEIATRPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTLVEPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTPVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLVEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAIN+SLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINSSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDY KYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYLKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABS49932.1| hemagglutinin [Influenza A virus (A/swine/Ontario/1/1981(H1N1))] Length=566

Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCDTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28614.1| hemagglutinin [Influenza A virus (A/swine/Kentucky/1/1976(H1N1))] gb|ABV45838.1| hemagglutinin [Influenza A virus (A/Wisconsin/301/1976(H1N1))] gb|ABX58668.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/30747/1976(H1N1))] gb|ACK99410.1| hemagglutinin [Influenza A virus (A/swine/Wisconsin/30954/1976(H1N1))] Length=566

Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/566 (91%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGPGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVI+KMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIKKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28537.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/10/1977(H1N1))] Length=566

Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFAVTNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGPGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVI+KMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSVIKKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABQ44394.1| hemagglutinin [Influenza A virus (A/New Jersey/1976(H1N1))] Length=566

Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/566 (91%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLLTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKK NSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKENSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNT CQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTKCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD +STQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQRSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLDIWTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACE77927.1| hemagglutinin [Influenza A virus (A/swine/Korea/CAN01/2004(H1N1))] Length=566

Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/566 (90%), Positives = 547/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLYTFATA+ADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLE+KHNGKLCK Sbjct 1    MKAILVVLLYTFATADADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLENKHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRG+APLHLGKCNIAGW+LGNPECESL TASSWSYIVET +SDNGTCYPGDFI+YEELRE Sbjct 61   LRGIAPLHLGKCNIAGWLLGNPECESLVTASSWSYIVETPNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 LSSVSSFERFEIFPK +SWPNH+++KGVTAACP+AGA SFY+NLIWLV+KGNSYPKLSK Sbjct 121  HLSSVSSFERFEIFPKANSWPNHETDKGVTAACPYAGANSFYRNLIWLVQKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLV+WGIHHP TS DQQ+LYQNADAYVFVGSS+YSK+FKPEIA RPKVR Q Sbjct 181  SYINNKKKEVLVIWGIHHPPTSTDQQTLYQNADAYVFVGSSKYSKRFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAF M+R +GSGII+SD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFPMKRGSGSGIIVSDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNS+IEKMNTQFTAVGKEF+ LEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADQKSTQNAIDGITNKVNSIIEKMNTQFTAVGKEFSQLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IE+LN KVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG Sbjct 421  IESLNNKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABW36333.1| hemagglutinin [Influenza A virus (A/swine/Ontario/2/1981(H1N1))] Length=566

Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNIGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMSRGSGSGIIISDTPIHDCDTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABW71503.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/2/1978(H1N1))] Length=566

Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28647.1| hemagglutinin [Influenza A virus (A/swine/Nebraska/123/1977(H1N1))] Length=566

Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y+KKFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNKKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGI+ISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIVISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABW36344.1| hemagglutinin [Influenza A virus (A/swine/Ontario/3/1981(H1N1))] Length=566

Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 512/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSY+VETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYVVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCDTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNRE+IDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREKIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABU80232.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/86/1977(H1N1))] Length=566

Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/566 (90%), Positives = 546/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKA+L+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAMLLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+S+NGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSNNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPSTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP++IG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVSIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28669.1| hemagglutinin [Influenza A virus (A/swine/Ontario/7/1981(H1N1))] Length=566

Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLLYTF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLYTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISDTP+HDC+TTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDTPIHDCDTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIY ILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYYILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABY51204.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/4/1978(H1N1))] Length=566

Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQN+HP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNVHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABS49921.1| hemagglutinin [Influenza A virus (A/swine/Iowa/1/1977(H1N1))] Length=566

Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/566 (90%), Positives = 545/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKE+LVLWGIHHPSTS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEILVLWGIHHPSTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGI+ISD PVHDCNT CQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGILISDAPVHDCNTKCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACQ42242.1| hemagglutinin [Influenza A virus (A/Auckland/1/2009(H1N1))] Length=524

Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/524 (100%), Positives = 524/524 (100%), Gaps = 0/524 (0%)

Query 43   VTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS  102 VTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS Sbjct 1    VTHSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS  60

Query 103  DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFY  162 DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFY Sbjct 61   DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFY  120

Query 163  KNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSR  222 KNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSR Sbjct 121  KNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSR  180

Query 223  YSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGI  282 YSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGI Sbjct 181  YSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGI  240

Query 283  IISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQ  342 IISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQ Sbjct 241  IISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQ  300

Query 343  SRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEK  402 SRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEK Sbjct 301  SRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEK  360

Query 403  MNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNL  462 MNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNL Sbjct 361  MNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNL  420

Query 463  YEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKL  522 YEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKL Sbjct 421  YEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKL  480

Query 523  ESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI  566 ESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI Sbjct 481  ESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI  524

>gb|ABR28581.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/82/1977(H1N1))] gb|ABU80221.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/84/1977(H1N1))] gb|ABU80243.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/87/1977(H1N1))] gb|ABU80254.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/88/1977(H1N1))] Length=566

Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TF ANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFTAANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP++IG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVSIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABU80410.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/48/1977(H1N1))] gb|ABW36322.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/23/1976(H1N1))] Length=566

Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAI +VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAIPLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABR28625.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/27/1976(H1N1))] gb|ABU80188.1| hemagglutinin [Influenza A virus (A/swine/Minnesota/24/1975(H1N1))] Length=566

Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TFA NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFAATNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L G+APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGGIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPKTSSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKL+K Sbjct 121  QLSSVSSFERFEIFPKTSSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLNK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNT CQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTKCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ACI48760.1| hemagglutinin [Influenza A virus (A/swine/Shanghai/1/2007(H1N2))] Length=566

Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/566 (90%), Positives = 544/566 (96%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAILVVLLY F  NADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILVVLLYAFTRGNADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 LRGVAPLHLGKCNIAGW+LGNPECE L TASSWSYIVETS+SDNGTCYPGDF +YEELRE Sbjct 61   LRGVAPLHLGKCNIAGWLLGNPECELLFTASSWSYIVETSNSDNGTCYPGDFTNYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SYIN+K KEVLVLWGIHHPST+ DQQSLYQNAD YVFV +S+YS KFKP+IA RPKVR Q Sbjct 181  SYINNKKKEVLVLWGIHHPSTNTDQQSLYQNADTYVFVATSKYSMKFKPKIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRM+YYWTLVEPGD ITFEATGNLVVPRYAFAM+R +GSGIIISDTPVH+C+TTCQTPK Sbjct 241  AGRMDYYWTLVEPGDTITFEATGNLVVPRYAFAMKRGSGSGIIISDTPVHNCSTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQNEQGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNEQGSGYAADRKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDG LD+WTYNAELLVLLENERTLDYHDSNV+NLYEKVR+QLKNNAKEIGNG Sbjct 421  IENLNKKVDDGLLDVWTYNAELLVLLENERTLDYHDSNVRNLYEKVRNQLKNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEEAKLNR+EIDGVKLESTRIYQILAIYSTVASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEEAKLNRKEIDGVKLESTRIYQILAIYSTVASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566

>gb|ABW86574.1| hemagglutinin [Influenza A virus (A/swine/Tennessee/5/1978(H1N1))] Length=566

Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/566 (90%), Positives = 543/566 (95%), Gaps = 0/566 (0%)

Query 1    MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCK  60 MKAIL+VLL TF ANADTLC+GYHANNSTDTVDTVLEKNVTVTHSVNLLED+HNGKLCK Sbjct 1    MKAILLVLLCTFTAANADTLCVGYHANNSTDTVDTVLEKNVTVTHSVNLLEDRHNGKLCK  60

Query 61   LRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSSDNGTCYPGDFIDYEELRE  120 L +APLHLGKCNIAGW+LGNPECE L T SSWSYIVETS+SDNGTCYPGDFI+YEELRE Sbjct 61   LGRIAPLHLGKCNIAGWLLGNPECELLFTVSSWSYIVETSNSDNGTCYPGDFINYEELRE  120

Query 121  QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVKKGNSYPKLSK  180 QLSSVSSFERFEIFPK SSWPNH++N+GVTAACP+AGA SFY+NLIWLVKKGNSYPKLSK Sbjct 121  QLSSVSSFERFEIFPKASSWPNHETNRGVTAACPYAGANSFYRNLIWLVKKGNSYPKLSK  180

Query 181  SYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFVGSSRYSKKFKPEIAIRPKVRDQ  240 SY+N+KGKEVLVLWGIHHP TS DQQSLYQNADAYVFVGSS+Y++KFKPEIA RPKVR Q Sbjct 181  SYVNNKGKEVLVLWGIHHPPTSTDQQSLYQNADAYVFVGSSKYNRKFKPEIAARPKVRGQ  240

Query 241  EGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMERNAGSGIIISDTPVHDCNTTCQTPK  300 GRMNYYWTL+EPGD ITFEATGNLVVPRYAFAM R +GSGIIISD PVHDCNTTCQTPK Sbjct 241  AGRMNYYWTLIEPGDTITFEATGNLVVPRYAFAMNRGSGSGIIISDAPVHDCNTTCQTPK  300

Query 301  GAINTSLPFQNIHPITIGKCPKYVKSTKLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTG  360 GAINTSLPFQNIHP+TIG+CPKYVKSTKLR+ATGLRN+PSIQSRGLFGAIAGFIEGGWTG Sbjct 301  GAINTSLPFQNIHPVTIGECPKYVKSTKLRMATGLRNIPSIQSRGLFGAIAGFIEGGWTG  360

Query 361  MVDGWYGYHHQNEQGSGYAADLKSTQNAIDEITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420 M+DGWYGYHHQN QGSGYAAD KSTQNAID ITNKVNSVIEKMNTQFTAVGKEFNHLEKR Sbjct 361  MIDGWYGYHHQNGQGSGYAADQKSTQNAIDGITNKVNSVIEKMNTQFTAVGKEFNHLEKR  420

Query 421  IENLNKKVDDGFLDIWTYNAELLVLLENERTLDYHDSNVKNLYEKVRSQLKNNAKEIGNG  480 IENLNKKVDDGFLD+WTYNAELLVLLENERTLD+HDSNVKNLYEKVRSQL+NNAKEIGNG Sbjct 421  IENLNKKVDDGFLDVWTYNAELLVLLENERTLDFHDSNVKNLYEKVRSQLRNNAKEIGNG  480

Query 481  CFEFYHKCDNTCMESVKNGTYDYPKYSEEAKLNREEIDGVKLESTRIYQILAIYSTVASS  540 CFEFYHKCD+TCMESVKNGTYDYPKYSEE+KLNREEIDGVKLESTRIYQILAIYST ASS Sbjct 481  CFEFYHKCDDTCMESVKNGTYDYPKYSEESKLNREEIDGVKLESTRIYQILAIYSTAASS  540

Query 541  LVLVVSLGAISFWMCSNGSLQCRICI  566 LVL+VSLGAISFWMCSNGSLQCRICI Sbjct 541  LVLLVSLGAISFWMCSNGSLQCRICI  566